This function get the count matrix, pvalues, and FC of a DEG analysis and create a report to help to detect possible problems with the data.

createReport(g, counts, tags, pvalues, path, pop = 400,
  name = "DEGreport")

Arguments

g

Character vector with the group the samples belong to.

counts

Matrix with counts for each samples and each gene. Should be same length than pvalues vector.

tags

Genes of DEG analysis

pvalues

pvalues of DEG analysis

path

path to save the figure

pop

random genes for background

name

name of the html file

Value

A HTML file with all figures and tables