Create report of RNAseq DEG anlaysis

This function get the count matrix, pvalues, and FC of a DEG analysis and create a report to help to detect possible problems with the data.

createReport(g, counts, tags, pvalues, path, pop = 400,
  name = "DEGreport")

Arguments

g

Character vector with the group the samples belong to.
counts

Matrix with counts for each samples and each gene. Should be same length than pvalues vector.
tags

Genes of DEG analysis
pvalues

pvalues of DEG analysis
path

path to save the figure
pop

random genes for background
name

name of the html file

Value

A HTML file with all figures and tables